STRINGSTRING
SUN_2319 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_2319" - Hypothetical protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_2319Hypothetical protein (359 aa)    
Predicted Functional Partners:
rplW
50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (93 aa)
 
 
      0.842
SUN_2368
Hypothetical protein (176 aa)
   
     
  0.778
SUN_2257
Hypothetical protein (347 aa)
   
          0.778
SUN_1127
Hypothetical protein (326 aa)
   
          0.778
SUN_0430
DNA polymerase III subunit delta (325 aa)
   
          0.778
SUN_0420
Hypothetical protein (336 aa)
   
          0.777
SUN_0386
Hypothetical protein (147 aa)
   
          0.777
SUN_1049
Transformation system protein (191 aa)
   
        0.776
SUN_0666
Hypothetical protein (121 aa)
   
          0.776
SUN_1106
Hypothetical protein (146 aa)
   
          0.775
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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