Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LVIS_0768 | LVIS_0780 | RibT protein, riboflavin biosynthesis acetyltransferase (GNAT) family. | TPR repeat protein. | 0.764 |
LVIS_0768 | LVIS_0790 | RibT protein, riboflavin biosynthesis acetyltransferase (GNAT) family. | Hypothetical protein; Belongs to the UPF0346 family. | 0.533 |
LVIS_0768 | LVIS_1546 | RibT protein, riboflavin biosynthesis acetyltransferase (GNAT) family. | Phosphoglycerol transferase related protein, alkaline phosphatase superfamily. | 0.504 |
LVIS_0780 | LVIS_0768 | TPR repeat protein. | RibT protein, riboflavin biosynthesis acetyltransferase (GNAT) family. | 0.764 |
LVIS_0780 | LVIS_0788 | TPR repeat protein. | Lysophospholipase L1 related esterase. | 0.524 |
LVIS_0780 | LVIS_0789 | TPR repeat protein. | Hypothetical protein. | 0.675 |
LVIS_0780 | LVIS_0790 | TPR repeat protein. | Hypothetical protein; Belongs to the UPF0346 family. | 0.729 |
LVIS_0780 | LVIS_1546 | TPR repeat protein. | Phosphoglycerol transferase related protein, alkaline phosphatase superfamily. | 0.614 |
LVIS_0780 | LVIS_1812 | TPR repeat protein. | Phosphoglycerol transferase related protein, alkaline phosphatase superfamily. | 0.617 |
LVIS_0787 | LVIS_0788 | Hypothetical protein. | Lysophospholipase L1 related esterase. | 0.609 |
LVIS_0787 | LVIS_0789 | Hypothetical protein. | Hypothetical protein. | 0.587 |
LVIS_0787 | LVIS_0790 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0346 family. | 0.587 |
LVIS_0788 | LVIS_0780 | Lysophospholipase L1 related esterase. | TPR repeat protein. | 0.524 |
LVIS_0788 | LVIS_0787 | Lysophospholipase L1 related esterase. | Hypothetical protein. | 0.609 |
LVIS_0788 | LVIS_0789 | Lysophospholipase L1 related esterase. | Hypothetical protein. | 0.972 |
LVIS_0788 | LVIS_0790 | Lysophospholipase L1 related esterase. | Hypothetical protein; Belongs to the UPF0346 family. | 0.926 |
LVIS_0788 | LVIS_0791 | Lysophospholipase L1 related esterase. | Hypothetical protein. | 0.503 |
LVIS_0789 | LVIS_0780 | Hypothetical protein. | TPR repeat protein. | 0.675 |
LVIS_0789 | LVIS_0787 | Hypothetical protein. | Hypothetical protein. | 0.587 |
LVIS_0789 | LVIS_0788 | Hypothetical protein. | Lysophospholipase L1 related esterase. | 0.972 |
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