Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LVIS_0452 | nadD | LVIS_0452 | LVIS_1029 | NAD-dependent protein deacetylase, SIR2 family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.932 |
| LVIS_0452 | nadE | LVIS_0452 | LVIS_0544 | NAD-dependent protein deacetylase, SIR2 family. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.925 |
| LVIS_0452 | nadK | LVIS_0452 | LVIS_1472 | NAD-dependent protein deacetylase, SIR2 family. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.921 |
| LVIS_0452 | polA | LVIS_0452 | LVIS_1042 | NAD-dependent protein deacetylase, SIR2 family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.430 |
| LVIS_1031 | LVIS_1220 | LVIS_1031 | LVIS_1220 | Predicted GTPase. | Hypothetical protein; Belongs to the UPF0473 family. | 0.569 |
| LVIS_1031 | LVIS_1471 | LVIS_1031 | LVIS_1471 | Predicted GTPase. | Pseudouridylate synthase, 23S RNA-specific; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.416 |
| LVIS_1031 | nadD | LVIS_1031 | LVIS_1029 | Predicted GTPase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.879 |
| LVIS_1031 | nadK | LVIS_1031 | LVIS_1472 | Predicted GTPase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.530 |
| LVIS_1220 | LVIS_1031 | LVIS_1220 | LVIS_1031 | Hypothetical protein; Belongs to the UPF0473 family. | Predicted GTPase. | 0.569 |
| LVIS_1220 | LVIS_1474 | LVIS_1220 | LVIS_1474 | Hypothetical protein; Belongs to the UPF0473 family. | Dithiol-disulfide isomerase. | 0.600 |
| LVIS_1220 | nadK | LVIS_1220 | LVIS_1472 | Hypothetical protein; Belongs to the UPF0473 family. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.478 |
| LVIS_1470 | LVIS_1471 | LVIS_1470 | LVIS_1471 | Hypothetical protein. | Pseudouridylate synthase, 23S RNA-specific; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.539 |
| LVIS_1470 | LVIS_1473 | LVIS_1470 | LVIS_1473 | Hypothetical protein. | Uncharacterized protein, RelA_SpoT domain. | 0.539 |
| LVIS_1470 | nadK | LVIS_1470 | LVIS_1472 | Hypothetical protein. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.539 |
| LVIS_1471 | LVIS_1031 | LVIS_1471 | LVIS_1031 | Pseudouridylate synthase, 23S RNA-specific; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Predicted GTPase. | 0.416 |
| LVIS_1471 | LVIS_1470 | LVIS_1471 | LVIS_1470 | Pseudouridylate synthase, 23S RNA-specific; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein. | 0.539 |
| LVIS_1471 | LVIS_1473 | LVIS_1471 | LVIS_1473 | Pseudouridylate synthase, 23S RNA-specific; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Uncharacterized protein, RelA_SpoT domain. | 0.836 |
| LVIS_1471 | LVIS_1474 | LVIS_1471 | LVIS_1474 | Pseudouridylate synthase, 23S RNA-specific; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Dithiol-disulfide isomerase. | 0.559 |
| LVIS_1471 | nadK | LVIS_1471 | LVIS_1472 | Pseudouridylate synthase, 23S RNA-specific; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.846 |
| LVIS_1473 | LVIS_1470 | LVIS_1473 | LVIS_1470 | Uncharacterized protein, RelA_SpoT domain. | Hypothetical protein. | 0.539 |
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