Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LVIS_0137 | LVIS_0309 | LVIS_0137 | LVIS_0309 | Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | Trehalose-6-phosphate hydrolase. | 0.912 |
LVIS_0137 | LVIS_1758 | LVIS_0137 | LVIS_1758 | Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | Alpha-galactosidase. | 0.912 |
LVIS_0309 | LVIS_0137 | LVIS_0309 | LVIS_0137 | Trehalose-6-phosphate hydrolase. | Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | 0.912 |
LVIS_0309 | LVIS_1758 | LVIS_0309 | LVIS_1758 | Trehalose-6-phosphate hydrolase. | Alpha-galactosidase. | 0.927 |
LVIS_0309 | LVIS_2254 | LVIS_0309 | LVIS_2254 | Trehalose-6-phosphate hydrolase. | ABC-type maltose transport system, permease component. | 0.431 |
LVIS_1757 | LVIS_1758 | LVIS_1757 | LVIS_1758 | Hypothetical protein; Belongs to the HesB/IscA family. | Alpha-galactosidase. | 0.566 |
LVIS_1758 | LVIS_0137 | LVIS_1758 | LVIS_0137 | Alpha-galactosidase. | Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | 0.912 |
LVIS_1758 | LVIS_0309 | LVIS_1758 | LVIS_0309 | Alpha-galactosidase. | Trehalose-6-phosphate hydrolase. | 0.927 |
LVIS_1758 | LVIS_1757 | LVIS_1758 | LVIS_1757 | Alpha-galactosidase. | Hypothetical protein; Belongs to the HesB/IscA family. | 0.566 |
LVIS_1758 | LVIS_1908 | LVIS_1758 | LVIS_1908 | Alpha-galactosidase. | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | 0.908 |
LVIS_1758 | LVIS_2254 | LVIS_1758 | LVIS_2254 | Alpha-galactosidase. | ABC-type maltose transport system, permease component. | 0.409 |
LVIS_1758 | LVIS_2258 | LVIS_1758 | LVIS_2258 | Alpha-galactosidase. | Beta-galactosidase. | 0.953 |
LVIS_1758 | LVIS_2259 | LVIS_1758 | LVIS_2259 | Alpha-galactosidase. | Beta-galactosidase. | 0.974 |
LVIS_1758 | galK | LVIS_1758 | LVIS_1904 | Alpha-galactosidase. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.545 |
LVIS_1758 | galT | LVIS_1758 | LVIS_1902 | Alpha-galactosidase. | Galactose-1-phosphate uridyltransferase. | 0.616 |
LVIS_1758 | guaA | LVIS_1758 | LVIS_1759 | Alpha-galactosidase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.455 |
LVIS_1908 | LVIS_1758 | LVIS_1908 | LVIS_1758 | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | Alpha-galactosidase. | 0.908 |
LVIS_1908 | LVIS_2258 | LVIS_1908 | LVIS_2258 | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | Beta-galactosidase. | 0.926 |
LVIS_1908 | LVIS_2259 | LVIS_1908 | LVIS_2259 | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | Beta-galactosidase. | 0.940 |
LVIS_1908 | galK | LVIS_1908 | LVIS_1904 | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.997 |
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