STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_1758Alpha-galactosidase. (737 aa)    
Predicted Functional Partners:
LVIS_2259
Beta-galactosidase.
 
 
 0.974
LVIS_2258
Beta-galactosidase.
 
 
 0.953
LVIS_0309
Trehalose-6-phosphate hydrolase.
  
 
 0.927
LVIS_0137
Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
    
 0.912
LVIS_1908
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family.
  
 
  0.908
galT
Galactose-1-phosphate uridyltransferase.
 
  
 0.616
LVIS_1757
Hypothetical protein; Belongs to the HesB/IscA family.
       0.566
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.545
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
       0.455
LVIS_2254
ABC-type maltose transport system, permease component.
 
  
 0.409
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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