Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LVIS_1755 | LVIS_2024 | LVIS_1755 | LVIS_2024 | Amino acid transporter. | Aminotransferase. | 0.591 |
| LVIS_1755 | arcA | LVIS_1755 | LVIS_2027 | Amino acid transporter. | Arginine deiminase. | 0.662 |
| LVIS_2022 | LVIS_2023 | LVIS_2022 | LVIS_2023 | CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.626 |
| LVIS_2022 | LVIS_2024 | LVIS_2022 | LVIS_2024 | CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | Aminotransferase. | 0.651 |
| LVIS_2022 | LVIS_2025 | LVIS_2022 | LVIS_2025 | CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | Amino acid transporter. | 0.597 |
| LVIS_2022 | arcA | LVIS_2022 | LVIS_2027 | CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | Arginine deiminase. | 0.653 |
| LVIS_2022 | arcB | LVIS_2022 | LVIS_2026 | CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.578 |
| LVIS_2023 | LVIS_2022 | LVIS_2023 | LVIS_2022 | Carbamate kinase; Belongs to the carbamate kinase family. | CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | 0.626 |
| LVIS_2023 | LVIS_2024 | LVIS_2023 | LVIS_2024 | Carbamate kinase; Belongs to the carbamate kinase family. | Aminotransferase. | 0.724 |
| LVIS_2023 | LVIS_2025 | LVIS_2023 | LVIS_2025 | Carbamate kinase; Belongs to the carbamate kinase family. | Amino acid transporter. | 0.738 |
| LVIS_2023 | LVIS_2207 | LVIS_2023 | LVIS_2207 | Carbamate kinase; Belongs to the carbamate kinase family. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.901 |
| LVIS_2023 | arcA | LVIS_2023 | LVIS_2027 | Carbamate kinase; Belongs to the carbamate kinase family. | Arginine deiminase. | 0.958 |
| LVIS_2023 | arcB | LVIS_2023 | LVIS_2026 | Carbamate kinase; Belongs to the carbamate kinase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.992 |
| LVIS_2023 | ptcA | LVIS_2023 | LVIS_2210 | Carbamate kinase; Belongs to the carbamate kinase family. | Ornithine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine. | 0.872 |
| LVIS_2024 | LVIS_1755 | LVIS_2024 | LVIS_1755 | Aminotransferase. | Amino acid transporter. | 0.591 |
| LVIS_2024 | LVIS_2022 | LVIS_2024 | LVIS_2022 | Aminotransferase. | CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | 0.651 |
| LVIS_2024 | LVIS_2023 | LVIS_2024 | LVIS_2023 | Aminotransferase. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.724 |
| LVIS_2024 | LVIS_2025 | LVIS_2024 | LVIS_2025 | Aminotransferase. | Amino acid transporter. | 0.918 |
| LVIS_2024 | arcA | LVIS_2024 | LVIS_2027 | Aminotransferase. | Arginine deiminase. | 0.709 |
| LVIS_2024 | arcB | LVIS_2024 | LVIS_2026 | Aminotransferase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.610 |
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