STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_2125Hypothetical protein. (430 aa)    
Predicted Functional Partners:
LVIS_2251
Hypothetical protein.
  
     0.605
LVIS_1974
Hypothetical protein.
  
     0.563
LVIS_2086
Hypothetical protein.
  
     0.521
LVIS_1787
Predicted metal-dependent membrane protease.
 
     0.504
LVIS_0100
Hypothetical protein.
  
     0.487
LVIS_1967
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
 
     0.475
LVIS_0012
D-alanyl-D-alanine carboxypeptidase.
  
     0.466
LVIS_1997
Predicted permease.
  
     0.462
LVIS_1804
Predicted drug exporter of the RND superfamily.
  
     0.436
LVIS_2022
CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
 
     0.426
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.