Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LVIS_0138 | LVIS_2226 | LVIS_0138 | LVIS_2226 | Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family. | 0.584 |
LVIS_0138 | LVIS_2258 | LVIS_0138 | LVIS_2258 | Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | Beta-galactosidase. | 0.911 |
LVIS_0996 | LVIS_1908 | LVIS_0996 | LVIS_1908 | Glucokinase. | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | 0.922 |
LVIS_0996 | LVIS_2120 | LVIS_0996 | LVIS_2120 | Glucokinase. | Transcriptional regulator/sugar kinase. | 0.929 |
LVIS_0996 | LVIS_2258 | LVIS_0996 | LVIS_2258 | Glucokinase. | Beta-galactosidase. | 0.904 |
LVIS_0996 | LVIS_2259 | LVIS_0996 | LVIS_2259 | Glucokinase. | Beta-galactosidase. | 0.910 |
LVIS_0996 | galK | LVIS_0996 | LVIS_1904 | Glucokinase. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.401 |
LVIS_0996 | xylA | LVIS_0996 | LVIS_0183 | Glucokinase. | D-xylose isomerase; Belongs to the xylose isomerase family. | 0.861 |
LVIS_1758 | LVIS_1908 | LVIS_1758 | LVIS_1908 | Alpha-galactosidase. | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | 0.908 |
LVIS_1758 | LVIS_2258 | LVIS_1758 | LVIS_2258 | Alpha-galactosidase. | Beta-galactosidase. | 0.953 |
LVIS_1758 | LVIS_2259 | LVIS_1758 | LVIS_2259 | Alpha-galactosidase. | Beta-galactosidase. | 0.974 |
LVIS_1758 | galK | LVIS_1758 | LVIS_1904 | Alpha-galactosidase. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.545 |
LVIS_1905 | LVIS_1908 | LVIS_1905 | LVIS_1908 | Na+/xyloside symporter related transporter. | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | 0.422 |
LVIS_1905 | LVIS_2258 | LVIS_1905 | LVIS_2258 | Na+/xyloside symporter related transporter. | Beta-galactosidase. | 0.631 |
LVIS_1905 | LVIS_2259 | LVIS_1905 | LVIS_2259 | Na+/xyloside symporter related transporter. | Beta-galactosidase. | 0.582 |
LVIS_1905 | galK | LVIS_1905 | LVIS_1904 | Na+/xyloside symporter related transporter. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.650 |
LVIS_1908 | LVIS_0996 | LVIS_1908 | LVIS_0996 | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | Glucokinase. | 0.922 |
LVIS_1908 | LVIS_1758 | LVIS_1908 | LVIS_1758 | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | Alpha-galactosidase. | 0.908 |
LVIS_1908 | LVIS_1905 | LVIS_1908 | LVIS_1905 | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | Na+/xyloside symporter related transporter. | 0.422 |
LVIS_1908 | LVIS_2120 | LVIS_1908 | LVIS_2120 | Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family. | Transcriptional regulator/sugar kinase. | 0.909 |
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