STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7I511_MEDTRLysine-specific demethylase ELF6-like protein, putative. (1481 aa)    
Predicted Functional Partners:
A0A072VEI5
Putative transcription factor WD40-like family.
   
 0.985
A0A072TTG4
Putative histone-lysine N-methyltransferase transcription factor C2H2 family.
   
 0.964
G7KAR8_MEDTR
Putative histone-lysine N-methyltransferase transcription factor C2H2 family.
   
 0.964
A2Q445_MEDTR
Nucleosome/chromatin assembly factor group protein.
   
 0.962
A2Q555_MEDTR
Nucleosome/chromatin assembly factor group protein.
   
 0.962
G7JE05_MEDTR
Nucleosome/chromatin assembly factor group protein.
   
 0.962
G7JMD2_MEDTR
Nucleosome/chromatin assembly factor group protein.
   
 0.962
G7I2Z6_MEDTR
Uncharacterized protein.
    
 0.955
G7I2Z7_MEDTR
Polycomb protein embryonic flower, putative.
    
 0.955
G7I2Z8_MEDTR
VEFS-box of polycomb protein.
    
 0.955
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.