STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7IK18_MEDTRDNA-binding storekeeper protein-related transcriptional regulator, putative. (420 aa)    
Predicted Functional Partners:
G7KVD6_MEDTR
DNA polymerase delta small subunit.
    
 0.628
G7J1L2_MEDTR
Crossover junction endonuclease MUS81-like protein.
    
 0.564
G7IMA2_MEDTR
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.542
A0A072UZI8
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
     
 0.502
B7FN64_MEDTR
NADH-ubiquinone oxidoreductase 19 kDa subunit family protein.
   
 
 0.461
I3S100_MEDTR
Putative NADH:ubiquinone reductase (H(+)-translocating).
    
   0.442
G7IEE2_MEDTR
Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.
    
 0.430
I3SQE6_MEDTR
Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.
    
 0.430
A0A072VQV0
Putative NADH:ubiquinone reductase (H(+)-translocating).
   
   0.429
G7JAY0_MEDTR
Tyrosine kinase family protein.
   
 0.424
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.