STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NF-YC6Putative transcription factor Hap3/NF-YB family. (119 aa)    
Predicted Functional Partners:
NF-YB2
Putative transcription factor Hap3/NF-YB family.
  
 0.946
G7IS21_MEDTR
Nuclear transcription factor Y subunit A4.
  
 
 0.940
G7LB97_MEDTR
Nuclear transcription factor Y subunit B7.
  
 0.931
NF-YA2
Putative transcription factor Hap2/NF-YA family.
  
 
 0.918
NF-YB4
Putative DNA-directed DNA polymerase transcription factor Hap3/NF-YB family.
    
 0.915
NF-YB12
Putative transcription factor Hap3/NF-YB family.
  
 0.900
NF-YA3
Putative transcription factor Hap2/NF-YA family.
  
 
 0.879
NF-YB8
Putative transcription factor Hap3/NF-YB family.
  
 0.870
A0A072TLS7
Putative transcription factor Hap2/NF-YA family.
  
 
 0.862
G7I8J1_MEDTR
Putative transcription factor Hap2/NF-YA family.
  
 
 0.841
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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