STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7IUP4_MEDTRPutative transcription factor bHLH family. (329 aa)    
Predicted Functional Partners:
G7KWV5_MEDTR
Transmembrane protein, putative.
  
     0.480
G7IUP2_MEDTR
Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.471
G7JW73_MEDTR
WEB family plant protein.
  
     0.468
G7JYE8_MEDTR
Protein vernalization insensitive-like protein.
  
     0.466
A0A072VI95
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.455
G7KCU0_MEDTR
Plastocyanin-like domain protein.
  
     0.444
G7L869_MEDTR
Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.439
G7I470_MEDTR
Xyloglucanase-specific endoglucanase inhibitor protein.
  
     0.430
G7JCU2_MEDTR
Uncharacterized protein.
  
     0.430
G7KY58_MEDTR
Mannan endo-1,4-beta-mannosidase.
  
   
 0.422
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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