STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FGM3_MEDTRTransmembrane protein 50A, putative. (135 aa)    
Predicted Functional Partners:
A0A072U351
Vacuolar protein sorting 55 protein.
   
 
 0.963
G7JZT8_MEDTR
Putative vacuolar protein sorting 55.
   
 
 0.963
A0A072VRJ1
Pre-mRNA-splicing factor syf2, putative.
      
 0.555
A0A072UAL5
Ketose-bisphosphate aldolase class-II family protein.
      
 0.524
G7KQ77_MEDTR
Fructose-bisphosphate aldolase class-II protein.
      
 0.521
G7LC21_MEDTR
Putative calmodulin-lysine N-methyltransferase.
      
 0.521
A0A072UDJ5
Ribosomal protein S6 family protein.
      
 0.519
B7FMI2_MEDTR
Ribosomal protein S6 family protein.
      
 0.519
A0A072UEK1
E3 ubiquitin-protein ligase listerin-like protein.
      
 0.518
A0A072VMJ6
Putative transcription factor WD40-like family.
      
 0.516
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.