STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7KUJ2_MEDTRPutative transcription factor SBP family. (1001 aa)    
Predicted Functional Partners:
G7KVD6_MEDTR
DNA polymerase delta small subunit.
    
 0.628
G7J1L2_MEDTR
Crossover junction endonuclease MUS81-like protein.
    
 0.564
G7IMA2_MEDTR
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.542
A0A072UZI8
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
     
 0.502
B7FN64_MEDTR
NADH-ubiquinone oxidoreductase 19 kDa subunit family protein.
   
 
 0.461
G7L5D2_MEDTR
Putative tetratricopeptide-like helical domain-containing protein.
    
 
 0.459
MTR_0011s0300
Putative tetratricopeptide-like helical domain-containing protein.
    
 
 0.451
A0A072USB8
Putative tetratricopeptide-like helical domain-containing protein.
    
 
 0.451
Q2HUZ9_MEDTR
Putative tetratricopeptide-like helical domain-containing protein.
    
 
 0.451
I3S100_MEDTR
Putative NADH:ubiquinone reductase (H(+)-translocating).
    
   0.442
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.