STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7JEY1_MEDTRB3 domain transcription factor VRN1-like protein. (429 aa)    
Predicted Functional Partners:
G7K0X3_MEDTR
Putative ribosomal protein S14.
   
 0.929
A0A072VBJ7
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.873
I3S2G2_MEDTR
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.873
B7FMK4_MEDTR
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.872
G7L0U5_MEDTR
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.872
A0A072UT55
Putative ribosomal protein S19e.
   
 0.871
B7FHE5_MEDTR
Putative ribosomal protein S19e.
   
 0.871
B7FGU9_MEDTR
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.868
G7L2J4_MEDTR
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.868
A0A072UEC5
40S ribosomal S10-like protein.
   
 0.865
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
Server load: low (24%) [HD]