STRINGSTRING
11412282 protein (Medicago truncatula) - STRING interaction network
"11412282" - B3 domain-containing transcription factor VRN1 in Medicago truncatula
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
11412282B3 domain-containing transcription factor VRN1 (429 aa)    
Predicted Functional Partners:
11423268
Ankyrin repeat-containing protein (582 aa)
       
 
  0.907
25482678
Extra-large GTP-binding protein (334 aa)
       
 
  0.906
11409906
Ca2+/calmodulin-dependent kinase phosphatase (379 aa)
           
  0.640
11415721
Extra-large GTP-binding protein; Guanine nucleotide-binding protein alpha-2 subunit (839 aa)
       
 
  0.628
11407063
Extra-large GTP-binding protein; Guanine nucleotide-binding protein alpha-2 subunit (908 aa)
       
 
  0.628
11415054
Extra-large GTP-binding protein; Guanine nucleotide-binding protein alpha-2 subunit (930 aa)
       
 
  0.628
11429447
C2H2-like zinc finger protein, putative; Zinc finger protein (517 aa)
           
  0.625
11437171
Ethylene-responsive transcription factor (187 aa)
           
  0.589
11440414
Transcription factor (497 aa)
           
  0.567
11428511
Transcription factor BIM3 (347 aa)
           
  0.522
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula, Medicago truncatula Gaertn., barrel medic
Server load: low (11%) [HD]