STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80485.1Putative CBS domain protein. (484 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.865
EAZ79113.1
Putative PAS domain S-box.
 
 
  0.860
EAZ81936.1
Ferredoxin-dependent glutamate synthase 1.
    
 0.851
EFQ79250.1
Putative sensory box histidine kinase/response regulator.
    
 0.819
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.809
EAZ82176.1
DNA polymerase III PolC-type (PolIII).
 
  
  0.783
EAZ82180.1
Transporter, solute:sodium symporter (SSS) family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.772
EAZ79525.1
DNA polymerase III, alpha subunit.
  
 
  0.767
EAZ82181.2
Lipoprotein.
 
     0.727
EAZ79960.1
Sensor histidine kinase/response regulator fusion protein.
    
 0.695
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.