Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAZ79399.1 | EAZ81161.1 | ALPR1_17163 | ALPR1_19033 | Membrane-bound lytic murein transglycosylase D. | Carboxyl protease; Belongs to the peptidase S41A family. | 0.511 |
| EAZ79399.1 | EAZ81464.1 | ALPR1_17163 | ALPR1_20548 | Membrane-bound lytic murein transglycosylase D. | Putative penicillin-binding protein 1A. | 0.491 |
| EAZ80982.1 | EAZ81161.1 | ALPR1_18138 | ALPR1_19033 | RIP metalloprotease RseP. | Carboxyl protease; Belongs to the peptidase S41A family. | 0.425 |
| EAZ80982.1 | EAZ81464.1 | ALPR1_18138 | ALPR1_20548 | RIP metalloprotease RseP. | Putative penicillin-binding protein 1A. | 0.480 |
| EAZ80982.1 | def-2 | ALPR1_18138 | ALPR1_19018 | RIP metalloprotease RseP. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.402 |
| EAZ81157.1 | EAZ81159.1 | ALPR1_19013 | ALPR1_19023 | Carbon-nitrogen hydrolase family protein. | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.785 |
| EAZ81157.1 | EAZ81160.2 | ALPR1_19013 | ALPR1_19028 | Carbon-nitrogen hydrolase family protein. | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.773 |
| EAZ81157.1 | EAZ81161.1 | ALPR1_19013 | ALPR1_19033 | Carbon-nitrogen hydrolase family protein. | Carboxyl protease; Belongs to the peptidase S41A family. | 0.479 |
| EAZ81157.1 | def-2 | ALPR1_19013 | ALPR1_19018 | Carbon-nitrogen hydrolase family protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.903 |
| EAZ81159.1 | EAZ81157.1 | ALPR1_19023 | ALPR1_19013 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Carbon-nitrogen hydrolase family protein. | 0.785 |
| EAZ81159.1 | EAZ81160.2 | ALPR1_19023 | ALPR1_19028 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.791 |
| EAZ81159.1 | EAZ81161.1 | ALPR1_19023 | ALPR1_19033 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Carboxyl protease; Belongs to the peptidase S41A family. | 0.511 |
| EAZ81159.1 | def-2 | ALPR1_19023 | ALPR1_19018 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.791 |
| EAZ81160.2 | EAZ81157.1 | ALPR1_19028 | ALPR1_19013 | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Carbon-nitrogen hydrolase family protein. | 0.773 |
| EAZ81160.2 | EAZ81159.1 | ALPR1_19028 | ALPR1_19023 | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.791 |
| EAZ81160.2 | EAZ81161.1 | ALPR1_19028 | ALPR1_19033 | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Carboxyl protease; Belongs to the peptidase S41A family. | 0.482 |
| EAZ81160.2 | def-2 | ALPR1_19028 | ALPR1_19018 | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.789 |
| EAZ81161.1 | EAZ79399.1 | ALPR1_19033 | ALPR1_17163 | Carboxyl protease; Belongs to the peptidase S41A family. | Membrane-bound lytic murein transglycosylase D. | 0.511 |
| EAZ81161.1 | EAZ80982.1 | ALPR1_19033 | ALPR1_18138 | Carboxyl protease; Belongs to the peptidase S41A family. | RIP metalloprotease RseP. | 0.425 |
| EAZ81161.1 | EAZ81157.1 | ALPR1_19033 | ALPR1_19013 | Carboxyl protease; Belongs to the peptidase S41A family. | Carbon-nitrogen hydrolase family protein. | 0.479 |
page 1 of 2