STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A19Y_1293Hypothetical protein. (247 aa)    
Predicted Functional Partners:
A19Y_4468
Hypothetical protein.
  
     0.768
A19Y_3618
Hypothetical protein.
  
     0.767
psbO
PsbO.
  
     0.762
A19Y_2894
Hypothetical protein.
  
     0.759
A19Y_0855
Hypothetical protein.
  
     0.744
A19Y_1249
Hypothetical protein.
  
     0.744
A19Y_1979
Hypothetical protein.
  
     0.744
A19Y_2701
Hypothetical protein.
  
     0.741
A19Y_1905
Hypothetical protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.736
psaF
PsaF.
  
     0.729
Your Current Organism:
Planktothrix agardhii
NCBI taxonomy Id: 388467
Other names: P. agardhii NIVA-CYA 126/8, Planktothrix agardhii NIVA-CYA 126/8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.