STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7B767_PHAVUHTH myb-type domain-containing protein. (555 aa)    
Predicted Functional Partners:
V7C5V0_PHAVU
Uncharacterized protein.
   
 0.609
V7CUA3_PHAVU
Uncharacterized protein.
  
 
  0.560
V7ARJ1_PHAVU
Zinc_ribbon_12 domain-containing protein.
  
 
  0.533
V7BBT5_PHAVU
Uncharacterized protein.
  
 
  0.528
V7CXD5_PHAVU
BHLH domain-containing protein.
  
 
   0.527
V7AK25_PHAVU
Uncharacterized protein.
  
     0.525
V7BI87_PHAVU
Uncharacterized protein.
  
 
 0.523
V7CSI6_PHAVU
Uncharacterized protein.
  
 
  0.523
V7CD84_PHAVU
Uncharacterized protein.
  
     0.522
V7ANN7_PHAVU
BHLH domain-containing protein.
  
 
  0.520
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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