STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7CAL0_PHAVUCBFD_NFYB_HMF domain-containing protein. (156 aa)    
Predicted Functional Partners:
D2X5V9_PHAVU
Nuclear factor Y subunit C.
    
 
 0.868
V7AGM9_PHAVU
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.760
V7AGW1_PHAVU
Uncharacterized protein.
    
 
 0.731
V7AJB6_PHAVU
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.684
V7B9I4_PHAVU
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.684
V7BW34_PHAVU
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.684
V7AI38_PHAVU
Uncharacterized protein.
    
 0.652
V7CXY7_PHAVU
SGF29 C-terminal domain-containing protein.
    
 0.652
PVTBP2
TATA-box binding protein.
    
 
 0.631
PVTBP1
TATA-box binding protein.
    
 
 0.631
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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