STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHAVU_L009100gBHLH domain-containing protein. (513 aa)    
Predicted Functional Partners:
V7ASE1_PHAVU
OVATE domain-containing protein.
  
     0.479
V7AL82_PHAVU
DUF4378 domain-containing protein.
  
     0.464
V7BSG8_PHAVU
OVATE domain-containing protein.
  
     0.463
V7AS18_PHAVU
Uncharacterized protein.
  
     0.459
V7CMV8_PHAVU
OVATE domain-containing protein.
  
     0.459
V7CY89_PHAVU
HMA domain-containing protein.
  
     0.459
V7BH73_PHAVU
Uncharacterized protein.
  
     0.456
V7BRH6_PHAVU
BAH domain-containing protein.
  
     0.455
V7CQC9_PHAVU
RING-CH-type domain-containing protein.
  
     0.451
V7ANK1_PHAVU
BHLH domain-containing protein.
  
     0.443
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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