STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglABeta-glucosidase, putative; GC: 48.06%; Codon Adaptation Index (CAI): 0.785. Curator(s): T. Kitten; Protein involved in hydrolase activity, acting on glycosyl bonds; Belongs to the glycosyl hydrolase 1 family. (479 aa)    
Predicted Functional Partners:
SSA_1149
Glycosyl hydrolase, family 1, putative; GC: 39.77%; Codon Adaptation Index (CAI): 0.78; Protein involved in hydrolase activity and hydrolase activity, acting on glycosyl bonds; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.912
ptcC
Phosphotransferase system (PTS), cellobiose-specific IIC component, putative; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.910
glcK
Glucokinase, putative; GC: 46.15%; Codon Adaptation Index (CAI): 0.799; Protein involved in kinase activity and glycolysis.
  
 
 0.907
scrB
Sucrose-6-phosphate hydrolase, putative; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.905
pgi
Glucose-6-phosphate isomerase, putative; GC: 41.79%; Codon Adaptation Index (CAI): 0.77; Belongs to the GPI family.
     
 0.904
Arb
6-phospho-beta-glucosidase, putative; GC: 49.38%; Codon Adaptation Index (CAI): 0.775. Curator(s): T. Kitten; Protein involved in hydrolase activity, acting on glycosyl bonds; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.902
pgm
Phosphoglucomutase; GC: 44.5%; Codon Adaptation Index (CAI): 0.821. Helix-turn-helix prediction: AraC.
     
  0.900
lacE
Phosphotransferase system lactose-specific component IIBC, putative; GC: 45.28%; Transporter classification TC:4.A.3.1.1. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.776. Curator(s): J. Alves.
  
  
 0.836
SSA_0270
Phosphotransferase system (PTS) cellobiose-specific, IIC component, putative; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.786
ptcB
Phosphotransferase system (PTS) cellobiose-specific component IIB, putative; GC: 48.43%; Transporter classification TC:4.A.3.2.2. Codon Adaptation Index (CAI): 0.765. Curator(s): P. Manque; Protein involved in transferase activity and phosphoenolpyruvate-dependent sugar phosphotransferase system.
  
 
 0.779
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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