node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dinG | nusA | SSA_0873 | SSA_1900 | ATP-dependent DNA helicase; 3'-5' exonuclease. | N utilization substance protein A, putative; Participates in both transcription termination and antitermination. | 0.416 |
dinG | rpoA | SSA_0873 | SSA_0132 | ATP-dependent DNA helicase; 3'-5' exonuclease. | DNA-directed RNA polymerase, alpha chain, putative; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.983 |
dinG | rpoB | SSA_0873 | SSA_0176 | ATP-dependent DNA helicase; 3'-5' exonuclease. | DNA-directed RNA polymerase I, beta chain (140 kDa subunit), putative; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
dinG | rpoC | SSA_0873 | SSA_0177 | ATP-dependent DNA helicase; 3'-5' exonuclease. | DNA-directed RNA polymerase I, beta chain (160 kDa subunit), putative; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.863 |
dinG | rpoZ | SSA_0873 | SSA_1850 | ATP-dependent DNA helicase; 3'-5' exonuclease. | DNA-directed RNA polymerase, subunit K/omega, putative; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.988 |
dinG | snf | SSA_0873 | SSA_1802 | ATP-dependent DNA helicase; 3'-5' exonuclease. | Snf2 family protein, putative; GC: 45.39%; Codon Adaptation Index (CAI): 0.785; Protein involved in ATP binding. | 0.847 |
gmk | nusA | SSA_1851 | SSA_1900 | Guanylate kinase, putative; Essential for recycling GMP and indirectly, cGMP. | N utilization substance protein A, putative; Participates in both transcription termination and antitermination. | 0.435 |
gmk | rpoZ | SSA_1851 | SSA_1850 | Guanylate kinase, putative; Essential for recycling GMP and indirectly, cGMP. | DNA-directed RNA polymerase, subunit K/omega, putative; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.975 |
gmk | snf | SSA_1851 | SSA_1802 | Guanylate kinase, putative; Essential for recycling GMP and indirectly, cGMP. | Snf2 family protein, putative; GC: 45.39%; Codon Adaptation Index (CAI): 0.785; Protein involved in ATP binding. | 0.595 |
greA | nusA | SSA_1796 | SSA_1900 | Transcription elongation factor GreA, putative; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | N utilization substance protein A, putative; Participates in both transcription termination and antitermination. | 0.547 |
greA | rpoA | SSA_1796 | SSA_0132 | Transcription elongation factor GreA, putative; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase, alpha chain, putative; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.983 |
greA | rpoB | SSA_1796 | SSA_0176 | Transcription elongation factor GreA, putative; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase I, beta chain (140 kDa subunit), putative; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
greA | rpoC | SSA_1796 | SSA_0177 | Transcription elongation factor GreA, putative; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase I, beta chain (160 kDa subunit), putative; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
greA | rpoD | SSA_1796 | SSA_0825 | Transcription elongation factor GreA, putative; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32), putative; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.447 |
greA | rpoZ | SSA_1796 | SSA_1850 | Transcription elongation factor GreA, putative; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase, subunit K/omega, putative; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.975 |
nusA | dinG | SSA_1900 | SSA_0873 | N utilization substance protein A, putative; Participates in both transcription termination and antitermination. | ATP-dependent DNA helicase; 3'-5' exonuclease. | 0.416 |
nusA | gmk | SSA_1900 | SSA_1851 | N utilization substance protein A, putative; Participates in both transcription termination and antitermination. | Guanylate kinase, putative; Essential for recycling GMP and indirectly, cGMP. | 0.435 |
nusA | greA | SSA_1900 | SSA_1796 | N utilization substance protein A, putative; Participates in both transcription termination and antitermination. | Transcription elongation factor GreA, putative; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.547 |
nusA | rplF | SSA_1900 | SSA_0122 | N utilization substance protein A, putative; Participates in both transcription termination and antitermination. | 50S ribosomal protein L6, putative; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.927 |
nusA | rpoA | SSA_1900 | SSA_0132 | N utilization substance protein A, putative; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, alpha chain, putative; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |