STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA70530.1KEGG: ajs:Ajs_1466 isoprenylcysteine carboxyl methyltransferase. (219 aa)    
Predicted Functional Partners:
ACA70531.1
KEGG: ajs:Ajs_1465 hypothetical protein.
 
    0.953
ACA70532.1
KEGG: ajs:Ajs_1464 hypothetical protein.
 
     0.850
ACA70535.1
KEGG: pmy:Pmen_2229 copper-translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein.
     0.579
ACA70533.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: net:Neut_0066 40-residue YVTN family beta-propeller repeat protein.
 
     0.546
ACA72840.1
PFAM: Mercuric transport protein MerT; KEGG: reu:Reut_D6497 mercuric transport protein MerT.
 
   
 0.439
htpX
HtpX domain protein; PFAM: peptidase M48 Ste24p; HtpX domain protein; KEGG: pen:PSEEN1582 heat shock protein HtpX; Belongs to the peptidase M48B family.
    
 
 0.432
rpsM
Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
    0.432
ACA70564.1
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mes:Meso_4435 heavy metal translocating P-type ATPase.
     0.411
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
Server load: low (30%) [HD]