STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA73623.1PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rme:Rmet_4293 alcohol dehydrogenase, zinc-binding. (307 aa)    
Predicted Functional Partners:
ACA74029.1
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Taurine catabolism dioxygenase TauD/TfdA; phosphopantetheine-binding; KEGG: pfo:Pfl_1846 peptide synthase.
  
 
 0.897
ACA73622.1
PFAM: DoxX family protein; KEGG: pfl:PFL_2372 SURF4 domain protein.
       0.594
ACA73621.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psa:PST_2903 probable short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.433
ACA73624.1
KEGG: pfo:Pfl_3548 hypothetical protein.
       0.422
ACA74025.1
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: pen:PSEEN3229 pyoverdine sidechain peptide synthetase.
  
  
 0.401
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.