STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA73789.1KEGG: pfo:Pfl_3011 hypothetical protein. (139 aa)    
Predicted Functional Partners:
ACA73787.1
KEGG: pfo:Pfl_3009 hypothetical protein.
 
     0.954
ACA73788.1
PFAM: Lytic transglycosylase catalytic; KEGG: pfo:Pfl_3010 lytic transglycosylase, catalytic.
 
     0.954
ACA73790.1
KEGG: pfo:Pfl_3012 hypothetical protein.
 
     0.952
ACA73785.1
KEGG: spe:Spro_0320 type IV B pilus protein.
 
     0.951
ACA73791.1
KEGG: pfo:Pfl_3013 hypothetical protein.
 
     0.904
ACA73781.1
KEGG: pfo:Pfl_3003 hypothetical protein.
 
     0.827
ACA73809.1
KEGG: pfo:Pfl_3017 hypothetical protein.
 
     0.808
ACA73811.1
KEGG: pfo:Pfl_3019 hypothetical protein.
 
     0.808
ACA73812.1
KEGG: pfo:Pfl_3020 hypothetical protein.
 
     0.808
ACA73813.1
KEGG: pfo:Pfl_3021 hypothetical protein.
 
     0.808
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.