STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA75405.1TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5209 amino acid ABC transporter, permease protein. (231 aa)    
Predicted Functional Partners:
ACA75404.1
PFAM: extracellular solute-binding protein family 3; KEGG: pfl:PFL_0342 amino acid ABC transporter, periplasmic amino acid-binding protein.
 0.988
ACA75403.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN5207 amino acid ABC transporter, ATP-binding protein.
 
 0.987
ACA75461.1
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pen:PSEEN0207 amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 0.978
ACA75406.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5210 amino acid ABC transporter, permease protein.
 
 
0.975
ACA74257.1
TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN3887 arginine/ornithine periplasmic-binding protein AotJ.
 
 0.896
ACA70946.1
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pen:PSEEN5087 amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 0.879
ACA74254.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3884 arginine/ornithine transport ATP-binding protein AotP.
  
 0.857
ACA73300.1
PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN2667 amino acid ABC transporter, periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.841
ACA75598.1
PFAM: extracellular solute-binding protein family 3; KEGG: psp:PSPPH_1023 amino acid ABC transporter, periplasmic amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.801
ACA75463.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0205 amino acid ABC transporter, ATP-binding protein.
   
 0.775
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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