STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE50134.1Multisubunit sodium/proton antiporter, MrpB subunit. (137 aa)    
Predicted Functional Partners:
SEE50175.1
Multisubunit sodium/proton antiporter, MrpC subunit.
 
 
 0.997
SEE50221.1
Multisubunit sodium/proton antiporter, MrpD subunit.
 
 
 0.997
SEE50256.1
Multisubunit sodium/proton antiporter, MrpE subunit (TC 2.A.63.1).
 
 
 0.996
SEE50098.1
Multisubunit sodium/proton antiporter, MrpA subunit.
 
 0.995
SEE50342.1
Multisubunit sodium/proton antiporter, MrpG subunit.
 
 
 0.995
SEE50300.1
Multisubunit sodium/proton antiporter, MrpF subunit.
 
 
 0.993
SEE27157.1
NADH-quinone oxidoreductase subunit L.
 
 
 0.848
SEE26584.1
4Fe-4S dicluster domain-containing protein.
  
   0.690
SEE27007.1
NADH-quinone oxidoreductase subunit I.
  
   0.690
SEE80739.1
4Fe-4S dicluster domain-containing protein.
  
   0.690
Your Current Organism:
Salinimicrobium catena
NCBI taxonomy Id: 390640
Other names: CGMCC 1.6101, DSM 23553, Flavobacteriaceae bacterium HY1, JCM 14015, S. catena, Salegentibacter catena, Salegentibacter catena Ying et al. 2007, Salinimicrobium catena (Ying et al. 2007) Lim et al. 2008 emend. Nedashkovskaya et al. 2010, strain HY1
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