Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tpet_0542 | buk | Tpet_0542 | Tpet_1041 | Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | 0.522 |
Tpet_1040 | Tpet_1042 | Tpet_1040 | Tpet_1042 | Hypothetical protein. | PFAM: phosphate acetyl/butaryl transferase. | 0.484 |
Tpet_1040 | buk | Tpet_1040 | Tpet_1041 | Hypothetical protein. | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | 0.484 |
Tpet_1042 | Tpet_1040 | Tpet_1042 | Tpet_1040 | PFAM: phosphate acetyl/butaryl transferase. | Hypothetical protein. | 0.484 |
Tpet_1042 | Tpet_1615 | Tpet_1042 | Tpet_1615 | PFAM: phosphate acetyl/butaryl transferase. | PFAM: phosphate acetyl/butaryl transferase. | 0.904 |
Tpet_1042 | Tpet_1731 | Tpet_1042 | Tpet_1731 | PFAM: phosphate acetyl/butaryl transferase. | Glutamate dehydrogenase (NAD/NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.419 |
Tpet_1042 | buk | Tpet_1042 | Tpet_1041 | PFAM: phosphate acetyl/butaryl transferase. | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | 0.999 |
Tpet_1615 | Tpet_1042 | Tpet_1615 | Tpet_1042 | PFAM: phosphate acetyl/butaryl transferase. | PFAM: phosphate acetyl/butaryl transferase. | 0.904 |
Tpet_1615 | Tpet_1731 | Tpet_1615 | Tpet_1731 | PFAM: phosphate acetyl/butaryl transferase. | Glutamate dehydrogenase (NAD/NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.419 |
Tpet_1615 | buk | Tpet_1615 | Tpet_1041 | PFAM: phosphate acetyl/butaryl transferase. | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | 0.996 |
Tpet_1731 | Tpet_1042 | Tpet_1731 | Tpet_1042 | Glutamate dehydrogenase (NAD/NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | PFAM: phosphate acetyl/butaryl transferase. | 0.419 |
Tpet_1731 | Tpet_1615 | Tpet_1731 | Tpet_1615 | Glutamate dehydrogenase (NAD/NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | PFAM: phosphate acetyl/butaryl transferase. | 0.419 |
Tpet_1731 | buk | Tpet_1731 | Tpet_1041 | Glutamate dehydrogenase (NAD/NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | 0.745 |
buk | Tpet_0542 | Tpet_1041 | Tpet_0542 | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | 0.522 |
buk | Tpet_1040 | Tpet_1041 | Tpet_1040 | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | Hypothetical protein. | 0.484 |
buk | Tpet_1042 | Tpet_1041 | Tpet_1042 | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | PFAM: phosphate acetyl/butaryl transferase. | 0.999 |
buk | Tpet_1615 | Tpet_1041 | Tpet_1615 | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | PFAM: phosphate acetyl/butaryl transferase. | 0.996 |
buk | Tpet_1731 | Tpet_1041 | Tpet_1731 | TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family. | Glutamate dehydrogenase (NAD/NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.745 |