STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_1981TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: oan:Oant_3198 arsenical-resistance protein. (352 aa)    
Predicted Functional Partners:
Smal_1980
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rle:RL2884 putative arsenate reductase.
  
  
 0.849
Smal_1982
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xcb:XC_2214 thioredoxin reductase.
     
 0.788
Smal_1983
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: psa:PST_2095 monooxygenase, putative.
 
   
 0.773
Smal_1979
PFAM: regulatory protein ArsR; KEGG: rme:Rmet_0333 transcriptional regulator, ArsR family.
  
  
 0.732
Smal_1978
TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bxe:Bxe_B0301 putative arsinic resistance protein ArsH.
     
 0.618
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
      
 0.595
Smal_1977
TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: xau:Xaut_0876 arsenate reductase.
     
 0.584
Smal_1984
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: psa:PST_0236 arsenate reductase, putative.
 
  
 0.562
Smal_0795
PFAM: Glutathione S-transferase domain; KEGG: bpa:BPP2935 glutathione S-transferase.
      
 0.548
Smal_1358
PFAM: Glutathione S-transferase domain; KEGG: met:M446_4826 glutathione S-transferase domain.
      
 0.548
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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