node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Smal_3192 | thiG | Smal_3192 | Smal_3190 | PFAM: Citrate transporter; TrkA-C domain protein; KEGG: xac:XAC3304 sulfur deprivation response regulator. | Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.746 |
Smal_3192 | trmB | Smal_3192 | Smal_3191 | PFAM: Citrate transporter; TrkA-C domain protein; KEGG: xac:XAC3304 sulfur deprivation response regulator. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.752 |
Smal_3583 | rlmD | Smal_3583 | Smal_2971 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.528 |
Smal_3583 | rlmE | Smal_3583 | Smal_1466 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.941 |
Smal_3583 | rpmD | Smal_3583 | Smal_0774 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | TIGRFAM: ribosomal protein L30; KEGG: xoo:XOO3564 50S ribosomal protein L30. | 0.861 |
Smal_3583 | trmB | Smal_3583 | Smal_3191 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.633 |
Smal_3583 | truB | Smal_3583 | Smal_2813 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.604 |
Smal_3603 | trmB | Smal_3603 | Smal_3191 | PFAM: protein of unknown function DUF88; KEGG: xcb:XC_3839 hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.683 |
rlmD | Smal_3583 | Smal_2971 | Smal_3583 | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.528 |
rlmD | trmB | Smal_2971 | Smal_3191 | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.596 |
rlmE | Smal_3583 | Smal_1466 | Smal_3583 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.941 |
rlmE | rpmD | Smal_1466 | Smal_0774 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | TIGRFAM: ribosomal protein L30; KEGG: xoo:XOO3564 50S ribosomal protein L30. | 0.931 |
rlmE | trmB | Smal_1466 | Smal_3191 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.610 |
rlmE | truB | Smal_1466 | Smal_2813 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.733 |
rpmD | Smal_3583 | Smal_0774 | Smal_3583 | TIGRFAM: ribosomal protein L30; KEGG: xoo:XOO3564 50S ribosomal protein L30. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.861 |
rpmD | rlmE | Smal_0774 | Smal_1466 | TIGRFAM: ribosomal protein L30; KEGG: xoo:XOO3564 50S ribosomal protein L30. | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.931 |
rpmD | trmB | Smal_0774 | Smal_3191 | TIGRFAM: ribosomal protein L30; KEGG: xoo:XOO3564 50S ribosomal protein L30. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.649 |
rpmD | truB | Smal_0774 | Smal_2813 | TIGRFAM: ribosomal protein L30; KEGG: xoo:XOO3564 50S ribosomal protein L30. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.675 |
serS | trmB | Smal_2535 | Smal_3191 | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.782 |
serS | truB | Smal_2535 | Smal_2813 | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.635 |