STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepQPeptidase M24; Splits dipeptides with a prolyl residue in the C-terminal position. (443 aa)    
Predicted Functional Partners:
Smal_3274
PFAM: protein of unknown function DUF1631; KEGG: xcb:XC_0964 hypothetical protein.
  
    0.638
Smal_3275
PFAM: type IV pilus assembly PilZ; KEGG: xcb:XC_0965 hypothetical protein.
       0.638
Smal_3277
PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: xcb:XC_0905 aminopeptidase P.
  
   
0.593
Smal_0031
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xcv:XCV0151 transcriptional regulator, LacI family.
  
 
 0.576
Smal_1775
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xcb:XC_2729 transcriptional regulator.
  
 
 0.576
Smal_2686
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xcv:XCV2511 transcriptional regulator, LacI family.
  
 
 0.576
Smal_3423
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xoo:XOO3918 transcriptional regulator LacI family.
  
 
 0.576
Smal_0302
KEGG: xcb:XC_0023 hypothetical protein.
  
     0.510
Smal_1011
TIGRFAM: aspartate kinase; diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; aspartate/glutamate/uridylate kinase; KEGG: xcb:XC_1372 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
  
 0.509
Smal_3933
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: xcb:XC_4105 dipeptidyl-peptidase.
 
     0.501
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.