STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiEUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (253 aa)    
Predicted Functional Partners:
Smal_0676
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: xac:XAC0873 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase.
  
  
 0.922
Smal_0675
2-polyprenyl-6-methoxyphenol 4-hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: monooxygenase FAD-binding; KEGG: xac:XAC0872 2-octaprenyl-6-methoxyphenyl hydroxylase.
  
  
 0.920
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 
 0.909
Smal_0715
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: xom:XOO_3418 tryptophan repressor binding protein; Belongs to the WrbA family.
     
  0.900
Smal_1807
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: azo:azo1477 probable NAD(P)H quinone oxidoreductase.
     
  0.900
Smal_2429
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: csa:Csal_0147 NAD(P)H dehydrogenase (quinone).
     
  0.900
Smal_3642
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: rru:Rru_A3066 NAD(P)H dehydrogenase (quinone).
     
  0.900
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
 
 0.832
Smal_3461
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: xcb:XC_0670 cytosine deaminase.
       0.585
Smal_3459
PFAM: Peptidase M1 membrane alanine aminopeptidase; Leukotriene A4 hydrolase; KEGG: xcb:XC_0676 aminopeptidase.
       0.495
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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