Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tmel_0316 | ftsZ | Tmel_0316 | Tmel_1275 | Hypothetical protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.928 |
Tmel_0316 | murG | Tmel_0316 | Tmel_0891 | Hypothetical protein. | Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.470 |
Tmel_1273 | Tmel_1274 | Tmel_1273 | Tmel_1274 | Hypothetical protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.804 |
Tmel_1273 | Tmel_1276 | Tmel_1273 | Tmel_1276 | Hypothetical protein. | PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase. | 0.803 |
Tmel_1273 | Tmel_1277 | Tmel_1273 | Tmel_1277 | Hypothetical protein. | Hypothetical protein. | 0.795 |
Tmel_1273 | Tmel_1282 | Tmel_1273 | Tmel_1282 | Hypothetical protein. | TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl. | 0.622 |
Tmel_1273 | ftsZ | Tmel_1273 | Tmel_1275 | Hypothetical protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.804 |
Tmel_1273 | murA | Tmel_1273 | Tmel_1285 | Hypothetical protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.621 |
Tmel_1274 | Tmel_1273 | Tmel_1274 | Tmel_1273 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Hypothetical protein. | 0.804 |
Tmel_1274 | Tmel_1276 | Tmel_1274 | Tmel_1276 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase. | 0.835 |
Tmel_1274 | Tmel_1277 | Tmel_1274 | Tmel_1277 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Hypothetical protein. | 0.805 |
Tmel_1274 | Tmel_1282 | Tmel_1274 | Tmel_1282 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl. | 0.756 |
Tmel_1274 | ftsZ | Tmel_1274 | Tmel_1275 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.991 |
Tmel_1274 | murA | Tmel_1274 | Tmel_1285 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.737 |
Tmel_1274 | murG | Tmel_1274 | Tmel_0891 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.630 |
Tmel_1276 | Tmel_1273 | Tmel_1276 | Tmel_1273 | PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase. | Hypothetical protein. | 0.803 |
Tmel_1276 | Tmel_1274 | Tmel_1276 | Tmel_1274 | PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.835 |
Tmel_1276 | Tmel_1277 | Tmel_1276 | Tmel_1277 | PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase. | Hypothetical protein. | 0.805 |
Tmel_1276 | Tmel_1282 | Tmel_1276 | Tmel_1282 | PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase. | TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl. | 0.654 |
Tmel_1276 | ftsZ | Tmel_1276 | Tmel_1275 | PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.850 |
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