STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_0049PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: stp:Strop_0044 protein phosphatase 2C domain protein. (478 aa)    
Predicted Functional Partners:
Sare_0053
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_0048 protein kinase.
 
 0.988
Sare_3480
PFAM: protein of unknown function RIO1; protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_3253 protein kinase.
 
 0.962
Sare_0052
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_0047 protein kinase.
 
 0.950
Sare_0047
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: stp:Strop_0042 FHA domain containing protein.
 
 
 
 0.915
Sare_0048
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: stp:Strop_0043 FHA domain containing protein.
 
 
 
 0.904
Sare_3610
Transketolase domain protein; PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: stp:Strop_3370 transketolase domain protein.
  
 0.877
Sare_0775
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_0831 protein kinase.
 
 
 0.839
Sare_2255
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_2112 protein kinase.
 
 0.838
Sare_0798
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_0852 protein kinase.
 
 
 0.837
Sare_4785
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: stp:Strop_4344 protein kinase.
 
 
 0.836
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.