STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (220 aa)    
Predicted Functional Partners:
Sare_1485
TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: stp:Strop_1542 methionine-R-sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
 
 0.997
Sare_0097
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; NHL repeat containing protein; KEGG: stp:Strop_0100 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
   
 0.951
Sare_4518
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: stp:Strop_4098 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
   
 0.949
Sare_4758
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: stp:Strop_4318 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
   
 0.949
Sare_4121
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; glutaredoxin 2; KEGG: stp:Strop_3740 glutaredoxin-like protein.
  
 
 0.906
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.869
Sare_4667
KEGG: cbu:CBU_1950 hypothetical protein.
  
 
 0.794
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
    
 0.743
Sare_0421
PFAM: glutaredoxin 2; KEGG: stp:Strop_0351 glutaredoxin 2.
  
 
 0.714
Sare_0862
PFAM: histidine triad (HIT) protein; KEGG: stp:Strop_0919 histidine triad (HIT) protein.
       0.605
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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