STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2827PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_2630 alcohol dehydrogenase, zinc-binding domain protein. (339 aa)    
Predicted Functional Partners:
Sare_2029
Beta-ketoacyl synthase; PFAM: phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: sen:SACE_5308 iterative type I polyketide synthase.
 
  
   0.877
Sare_3152
Beta-ketoacyl synthase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sma:SAV416 modular polyketide synthase.
 
 
 0.845
Sare_1249
Beta-ketoacyl synthase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sma:SAV418 modular polyketide synthase.
 
 
 0.726
Sare_1248
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sma:SAV418 modular polyketide synthase.
 
 
 0.677
Sare_4951
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sen:SACE_5532 iterative type I polyketide synthase.
 
 
 0.649
Sare_2828
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_2631 short-chain dehydrogenase/reductase SDR.
  
   0.540
Sare_2826
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2629 fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
     
 0.489
Sare_2072
Beta-ketoacyl synthase; PFAM: Thioesterase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_2654 beta-ketoacyl synthase.
 
 0.482
Sare_3414
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: stp:Strop_3188 alcohol dehydrogenase, zinc-binding domain protein.
 
    0.466
Sare_2407
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sde:Sde_3725 polyketide synthase modules and related proteins-like.
 
 
 0.465
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.