STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4524PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: stp:Strop_4104 stage II sporulation E family protein. (693 aa)    
Predicted Functional Partners:
Sare_4413
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: stp:Strop_4032 anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.994
Sare_4521
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: stp:Strop_4101 anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.992
Sare_3633
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: stp:Strop_3391 anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.988
Sare_1965
KEGG: sco:SCO4440 hypothetical protein.
 
 
 0.983
Sare_4335
Diguanylate cyclase/phosphodiesterase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: stp:Strop_3943 diguanylate cyclase.
  
 
 0.983
Sare_1730
KEGG: sen:SACE_3499 hypothetical protein.
  
 
 0.981
Sare_2243
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mta:Moth_1498 anti-sigma-factor antagonist (STAS) domain protein.
  
 
 0.981
Sare_2767
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ppr:PBPRA0351 hypothetical anti-anti-sigma regulatory factor.
  
 
 0.981
Sare_2769
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: stp:Strop_2572 sulfate transporter/antisigma-factor antagonist STAS.
  
 
 0.981
Sare_0870
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: stp:Strop_0927 diguanylate cyclase.
  
 
 0.975
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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