STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_4961PFAM: Enoyl-CoA hydratase/isomerase; KEGG: stp:Strop_4447 hypothetical protein. (253 aa)    
Predicted Functional Partners:
Sare_4006
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: stp:Strop_3624 3-hydroxybutyryl-CoA dehydrogenase.
 0.971
Sare_0172
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: stp:Strop_0163 3-hydroxybutyryl-CoA dehydrogenase.
 0.959
Sare_4000
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: stp:Strop_3618 3-hydroxybutyryl-CoA dehydrogenase.
 0.942
Sare_0034
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_0028 acyl-CoA dehydrogenase domain protein.
   
 0.936
Sare_0517
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_0429 acyl-CoA dehydrogenase domain protein.
   
 0.936
Sare_0654
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: stp:Strop_0707 enoyl-CoA hydratase/isomerase.
 
  
0.928
Sare_2386
KEGG: stp:Strop_2267 hypothetical protein.
   
 0.908
Sare_3994
TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_3612 crotonyl-CoA reductase.
   
  0.905
Sare_1511
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_1562 acyl-CoA dehydrogenase domain protein.
   
 0.780
Sare_0490
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: plu:plu0762 hypothetical protein.
   
 0.777
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.