STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_0132Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sus:Acid_0530 putative anti-sigma regulatory factor, serine/threonine protein kinase. (382 aa)    
Predicted Functional Partners:
Bphy_0129
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: afw:Anae109_0799 anti-sigma-factor antagonist.
 
 
 0.999
Bphy_0130
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_2415 anti-sigma-factor antagonist.
 
 
 0.999
Bphy_0133
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sus:Acid_0531 histidine kinase.
 
 
 0.994
Bphy_4210
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: bxe:Bxe_B1216 multi-sensor hybrid histidine kinase.
 
  
 0.983
Bphy_0131
PFAM: ATP-binding region ATPase domain protein; KEGG: aba:Acid345_2414 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 
0.967
Bphy_4332
PFAM: Hpt domain protein; KEGG: rme:Rmet_5713 Hpt domain protein.
  
  
 0.967
Bphy_0151
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: bxe:Bxe_A4283 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains).
  
 
 0.960
Bphy_1777
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: bxe:Bxe_A2913 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 
 0.960
Bphy_2120
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_A3335 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains).
  
 
 0.960
Bphy_3700
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B2035 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).
  
 
 0.960
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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