STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apaHBis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. (282 aa)    
Predicted Functional Partners:
Bphy_2405
KEGG: reu:Reut_A0389 hypothetical protein.
    
 0.977
Bphy_1046
PFAM: Ankyrin; KEGG: bxe:Bxe_A2259 putative ankyrin repeat harboring signal peptide protein.
   
 0.902
Bphy_4177
PFAM: Ankyrin; KEGG: bxe:Bxe_B1343 ankyrin domain protein.
   
 0.902
apaG
PFAM: ApaG domain protein; KEGG: bxe:Bxe_A0464 protein ApaG, Mg2 efflux/Co2 resistance-related protein, CorD-like.
  
  
 0.817
Bphy_2739
PFAM: Stringent starvation protein B; KEGG: bxe:Bxe_A0418 stringent starvation protein B, SspB.
  
     0.752
Bphy_3988
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bxe:Bxe_B0780 putative FKBP-type peptidyl-prolyl cis-transisomerase signal peptide protein.
   
 0.752
Bphy_4384
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bte:BTH_II0554 FK506-binding protein.
   
 0.752
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.
  
     0.742
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
   
 0.735
ftsB
Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.716
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.