STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_3179PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xau:Xaut_3350 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)    
Predicted Functional Partners:
Bphy_3178
PFAM: CoA-binding domain protein; KEGG: rle:pRL120177 putative pimeloyl-CoA synthetase.
  
  
 0.788
Bphy_1983
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_A3184 putative 3-hydroxyacyl-CoA dehydrogenase, PaaC-like.
 
 0.696
Bphy_1652
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A2495 putative enoyl(3-hydroxyisobutyryl)-coenzyme A hydratase/isomerase.
 
     0.663
Bphy_0358
KEGG: bxe:Bxe_A4067 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: extracellular solute-binding protein family 3.
   
 
 0.626
Bphy_4333
PFAM: response regulator receiver; Hpt domain protein; KEGG: bte:BTH_I2675 sensor histidine kinase/response regulator.
   
 
 0.626
Bphy_3180
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_7628 ABC transporter ATP-binding protein.
       0.625
Bphy_3181
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_3099 binding-protein-dependent transport systems inner membrane component.
       0.625
Bphy_0135
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: bxe:Bxe_B0221 multi-sensor hybrid histidine kinase.
  
 
 0.619
Bphy_5184
KEGG: bvi:Bcep1808_5667 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.619
Bphy_4210
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: bxe:Bxe_B1216 multi-sensor hybrid histidine kinase.
  
 
 0.617
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.