STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_3446KEGG: bxe:Bxe_B1047 ABC nitrate transporter, periplasmic ligand binding protein. (380 aa)    
Predicted Functional Partners:
Bphy_3445
PFAM: response regulator receiver; ANTAR domain protein; KEGG: bxe:Bxe_B1048 response regulator receiver (CheY) and ANTAR domain protein.
 
  
 0.946
Bphy_3180
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_7628 ABC transporter ATP-binding protein.
  
 0.682
Bphy_3960
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0494 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit.
  
 0.680
Bphy_3602
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C0155 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit.
  
 0.679
Bphy_4965
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_6755 ABC transporter related.
  
 0.645
Bphy_0956
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2356 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit.
  
 0.638
Bphy_3975
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_1365 binding-protein-dependent transport systems inner membrane component.
 
  
 0.636
ssuB
ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.624
Bphy_3601
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C0156 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
 
  
 0.576
Bphy_1648
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A2492 ABC aliphatic sulfonates transporter, inner membrane subunit.
 
  
 0.562
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.