STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_3462Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1036 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family. (353 aa)    
Predicted Functional Partners:
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.992
Bphy_3460
TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: bxe:Bxe_B1038 ABC sugar transporter, periplasmic ligand binding protein.
 0.983
Bphy_3461
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1037 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.965
Bphy_4658
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1404 ABC sugar transporter, ATPase subunit.
 
 0.845
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.844
Bphy_5517
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_6194 ABC transporter related.
 
 0.842
araG
ABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 0.840
Bphy_1236
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1998 ABC ribose transporter, fused ATPase subunits.
 
 0.837
araG-2
ABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 0.835
Bphy_0500
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_4201 periplasmic binding protein/LacI transcriptional regulator.
 
 0.832
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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