STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_3669TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: azc:AZC_4089 flavoprotein. (199 aa)    
Predicted Functional Partners:
Bphy_2874
PFAM: flavodoxin/nitric oxide synthase; KEGG: bxe:Bxe_A0278 flavoprotein.
  
  
 
0.925
Bphy_1576
TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: bxe:Bxe_A1353 putative Trp repressor binding protein; Belongs to the WrbA family.
  
  
 
0.916
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
Bphy_2520
PFAM: Ferritin Dps family protein; KEGG: bxe:Bxe_A3984 putative ferritin DPS-family DNA binding protein; Belongs to the Dps family.
  
  
 0.543
Bphy_5303
PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bxe:Bxe_B1170 phospholipid binding protein.
   
    0.447
Bphy_3670
KEGG: bxe:Bxe_A3017 hypothetical protein.
       0.425
Bphy_1229
PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: bxe:Bxe_A2005 putative serine protein kinase, PrkA.
   
    0.410
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.