STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_5237PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bja:bll0902 putative trehalose synthase protein. (554 aa)    
Predicted Functional Partners:
Bphy_4387
Malto-oligosyltrehalose synthase; KEGG: bxe:Bxe_B2867 putative glycosyl hydrolase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
 0.981
Bphy_4390
KEGG: bxe:Bxe_B2864 putative glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.971
Bphy_4392
Trehalose synthase; KEGG: bxe:Bxe_B2862 putative trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
0.970
Bphy_5335
KEGG: bxe:Bxe_B1322 glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.970
Bphy_5238
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mes:Meso_3687 alpha amylase, catalytic region.
 
  
 
0.964
Bphy_4388
4-alpha-glucanotransferase; KEGG: bxe:Bxe_B2866 glycoside hydrolase, family 77; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
 
 
 0.958
Bphy_4389
KEGG: bxe:Bxe_B2865 putative trehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
0.958
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.955
Bphy_3520
Alpha amylase catalytic region; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sfu:Sfum_2956 glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
 
0.946
Bphy_3790
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.945
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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