STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_5515Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_5989 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (365 aa)    
Predicted Functional Partners:
Bphy_5517
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_6194 ABC transporter related.
 0.996
Bphy_5518
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bch:Bcen2424_5992 periplasmic binding protein/LacI transcriptional regulator.
 0.987
Bphy_5516
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bte:BTH_I2344 ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.985
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.823
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.813
Bphy_0500
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_4201 periplasmic binding protein/LacI transcriptional regulator.
 
 0.805
Bphy_4658
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1404 ABC sugar transporter, ATPase subunit.
 
 0.800
araG
ABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 0.793
araG-2
ABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 0.791
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.781
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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