STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI61266.12-polyprenylphenol 6-hydroxylase accessory protein ubiB. (451 aa)    
Predicted Functional Partners:
ABI61265.1
Oligoendopeptidase F.
       0.811
ABI63204.1
Transcriptional regulator, TetR family.
 
     0.768
ABI61264.1
Hypothetical exported protein; Belongs to the UPF0335 family.
       0.541
ABI61263.1
Hypothetical protein.
       0.482
ABI61532.1
Hypothetical protein.
  
     0.470
ABI62643.1
Urea carboxylase.
     
 0.451
ABI61381.1
Hypothetical protein.
   
 
 0.436
coq7
2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 
 0.435
ABI62298.1
single-stranded-DNA-specific exonuclease recJ.
      0.405
ABI63035.1
2-polyprenyl-6-methoxyphenol hydroxylase.
   
 
 0.405
Your Current Organism:
Granulibacter bethesdensis
NCBI taxonomy Id: 391165
Other names: G. bethesdensis CGDNIH1, Granulibacter bethesdensis CGDNIH1, Granulibacter bethesdensis str. CGDNIH1, Granulibacter bethesdensis strain CGDNIH1
Server load: low (32%) [HD]