Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABI61226.1 | gmhA | GbCGDNIH1_0328 | GbCGDNIH1_1536 | ADP-heptose--LPS heptosyltransferase. | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. | 0.733 |
ABI61226.1 | hldD | GbCGDNIH1_0328 | GbCGDNIH1_1533 | ADP-heptose--LPS heptosyltransferase. | ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.701 |
ABI61226.1 | hldE | GbCGDNIH1_0328 | GbCGDNIH1_0513 | ADP-heptose--LPS heptosyltransferase. | D-glycero-D-manno-heptose-7-phosphate 1-kinase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family. | 0.788 |
ABI61410.1 | ABI61412.1 | GbCGDNIH1_0512 | GbCGDNIH1_0514 | Hypothetical protein. | protein-L-isoaspartate O-methyltransferase. | 0.416 |
ABI61410.1 | ABI61413.1 | GbCGDNIH1_0512 | GbCGDNIH1_0515 | Hypothetical protein. | Hypothetical membrane spanning protein. | 0.416 |
ABI61410.1 | ABI61414.1 | GbCGDNIH1_0512 | GbCGDNIH1_0516 | Hypothetical protein. | Epoxide hydrolase. | 0.416 |
ABI61410.1 | hldE | GbCGDNIH1_0512 | GbCGDNIH1_0513 | Hypothetical protein. | D-glycero-D-manno-heptose-7-phosphate 1-kinase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family. | 0.664 |
ABI61412.1 | ABI61410.1 | GbCGDNIH1_0514 | GbCGDNIH1_0512 | protein-L-isoaspartate O-methyltransferase. | Hypothetical protein. | 0.416 |
ABI61412.1 | ABI61413.1 | GbCGDNIH1_0514 | GbCGDNIH1_0515 | protein-L-isoaspartate O-methyltransferase. | Hypothetical membrane spanning protein. | 0.841 |
ABI61412.1 | ABI61414.1 | GbCGDNIH1_0514 | GbCGDNIH1_0516 | protein-L-isoaspartate O-methyltransferase. | Epoxide hydrolase. | 0.774 |
ABI61412.1 | hldE | GbCGDNIH1_0514 | GbCGDNIH1_0513 | protein-L-isoaspartate O-methyltransferase. | D-glycero-D-manno-heptose-7-phosphate 1-kinase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family. | 0.473 |
ABI61413.1 | ABI61410.1 | GbCGDNIH1_0515 | GbCGDNIH1_0512 | Hypothetical membrane spanning protein. | Hypothetical protein. | 0.416 |
ABI61413.1 | ABI61412.1 | GbCGDNIH1_0515 | GbCGDNIH1_0514 | Hypothetical membrane spanning protein. | protein-L-isoaspartate O-methyltransferase. | 0.841 |
ABI61413.1 | ABI61414.1 | GbCGDNIH1_0515 | GbCGDNIH1_0516 | Hypothetical membrane spanning protein. | Epoxide hydrolase. | 0.773 |
ABI61413.1 | hldE | GbCGDNIH1_0515 | GbCGDNIH1_0513 | Hypothetical membrane spanning protein. | D-glycero-D-manno-heptose-7-phosphate 1-kinase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family. | 0.473 |
ABI61414.1 | ABI61410.1 | GbCGDNIH1_0516 | GbCGDNIH1_0512 | Epoxide hydrolase. | Hypothetical protein. | 0.416 |
ABI61414.1 | ABI61412.1 | GbCGDNIH1_0516 | GbCGDNIH1_0514 | Epoxide hydrolase. | protein-L-isoaspartate O-methyltransferase. | 0.774 |
ABI61414.1 | ABI61413.1 | GbCGDNIH1_0516 | GbCGDNIH1_0515 | Epoxide hydrolase. | Hypothetical membrane spanning protein. | 0.773 |
ABI61414.1 | hldE | GbCGDNIH1_0516 | GbCGDNIH1_0513 | Epoxide hydrolase. | D-glycero-D-manno-heptose-7-phosphate 1-kinase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family. | 0.473 |
ABI62883.1 | gmhA | GbCGDNIH1_1985 | GbCGDNIH1_1536 | ADP-heptose--LPS heptosyltransferase. | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. | 0.740 |
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