STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI62052.1Hypothetical secreted protein. (151 aa)    
Predicted Functional Partners:
ABI62051.1
Hypothetical cytosolic protein.
     0.981
ABI62053.1
Carboxylesterase.
 
     0.934
ABI62049.1
DNA integration/recombination/inversion protein; Belongs to the 'phage' integrase family.
 
     0.649
ABI62054.1
Hypothetical protein.
  
     0.631
ABI62056.1
Metal-dependent hydrolase.
  
     0.594
ABI62057.1
Metal-dependent hydrolase.
  
     0.574
ABI62050.1
Hypothetical protein.
       0.552
Your Current Organism:
Granulibacter bethesdensis
NCBI taxonomy Id: 391165
Other names: G. bethesdensis CGDNIH1, Granulibacter bethesdensis CGDNIH1, Granulibacter bethesdensis str. CGDNIH1, Granulibacter bethesdensis strain CGDNIH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.