Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABI62642.1 | ABI62643.1 | GbCGDNIH1_1744 | GbCGDNIH1_1745 | Allophanate hydrolase. | Urea carboxylase. | 0.999 |
ABI62642.1 | ABI62644.1 | GbCGDNIH1_1744 | GbCGDNIH1_1746 | Allophanate hydrolase. | Hypothetical cytosolic protein. | 0.939 |
ABI62642.1 | ABI62645.1 | GbCGDNIH1_1744 | GbCGDNIH1_1747 | Allophanate hydrolase. | Hypothetical cytosolic protein. | 0.941 |
ABI62642.1 | ABI62648.1 | GbCGDNIH1_1744 | GbCGDNIH1_1750 | Allophanate hydrolase. | ABC transporter substrate-binding protein. | 0.824 |
ABI62642.1 | ABI62855.1 | GbCGDNIH1_1744 | GbCGDNIH1_1957 | Allophanate hydrolase. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.909 |
ABI62642.1 | gatB | GbCGDNIH1_1744 | GbCGDNIH1_0953 | Allophanate hydrolase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.961 |
ABI62642.1 | gatC | GbCGDNIH1_1744 | GbCGDNIH1_0950 | Allophanate hydrolase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.927 |
ABI62642.1 | ureA | GbCGDNIH1_1744 | GbCGDNIH1_2162 | Allophanate hydrolase. | Urease gamma subunit; Belongs to the urease gamma subunit family. | 0.900 |
ABI62642.1 | ureB | GbCGDNIH1_1744 | GbCGDNIH1_2163 | Allophanate hydrolase. | Urease beta subunit; Belongs to the urease beta subunit family. | 0.900 |
ABI62642.1 | ureC | GbCGDNIH1_1744 | GbCGDNIH1_2164 | Allophanate hydrolase. | Urease alpha subunit. | 0.900 |
ABI62643.1 | ABI62642.1 | GbCGDNIH1_1745 | GbCGDNIH1_1744 | Urea carboxylase. | Allophanate hydrolase. | 0.999 |
ABI62643.1 | ABI62644.1 | GbCGDNIH1_1745 | GbCGDNIH1_1746 | Urea carboxylase. | Hypothetical cytosolic protein. | 0.973 |
ABI62643.1 | ABI62645.1 | GbCGDNIH1_1745 | GbCGDNIH1_1747 | Urea carboxylase. | Hypothetical cytosolic protein. | 0.973 |
ABI62643.1 | ABI62648.1 | GbCGDNIH1_1745 | GbCGDNIH1_1750 | Urea carboxylase. | ABC transporter substrate-binding protein. | 0.888 |
ABI62643.1 | ABI62855.1 | GbCGDNIH1_1745 | GbCGDNIH1_1957 | Urea carboxylase. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.617 |
ABI62643.1 | ureA | GbCGDNIH1_1745 | GbCGDNIH1_2162 | Urea carboxylase. | Urease gamma subunit; Belongs to the urease gamma subunit family. | 0.906 |
ABI62643.1 | ureB | GbCGDNIH1_1745 | GbCGDNIH1_2163 | Urea carboxylase. | Urease beta subunit; Belongs to the urease beta subunit family. | 0.931 |
ABI62643.1 | ureC | GbCGDNIH1_1745 | GbCGDNIH1_2164 | Urea carboxylase. | Urease alpha subunit. | 0.935 |
ABI62644.1 | ABI62642.1 | GbCGDNIH1_1746 | GbCGDNIH1_1744 | Hypothetical cytosolic protein. | Allophanate hydrolase. | 0.939 |
ABI62644.1 | ABI62643.1 | GbCGDNIH1_1746 | GbCGDNIH1_1745 | Hypothetical cytosolic protein. | Urea carboxylase. | 0.973 |
page 1 of 3